Tutorials for microbial ecology analyses in R

If you don't know where to start in your analysis, check out Where to start? for some ideas. Or check out the following list of tutorials:

• Beginner R Tips
• Error bars with ggplot2
• NMDS Plot extras in R: Envfit
• Where to start?
• Contour Plots in R
• Alluvial Plots in R
• R functions to automatically manipulate data from MetaAmp
• Scatter plots in R
• Mantel Test in R
• Boxplots in R
• Indicator Species Analysis in R
• Correlation Heatmaps in R
• ANOSIM Test in R
• NMDS Plots in R
• Stacked Bar Plots in R
• Bubble Plots in R